Abstract
Nisin fermentation by Lactococcus lactis requires a low pH to maintain a relatively higher nisin activity. However, the acidic environment will result in cell arrest, and eventually decrease the relative nisin production. Hence, constructing an acid-resistant L. lactis is crucial for nisin harvest in acidic nisin fermentation. In this paper, the first discovery of the relationship between D-Asp amidation-associated gene (asnH) and acid resistance was reported. Overexpression of asnH in L. lactis F44 (F44A) resulted in a sevenfold increase in survival capacity during acid shift (pH 3) and enhanced nisin desorption capacity compared to F44 (wild type), which subsequently contributed to higher nisin production, reaching 5346 IU/mL, 57.0% more than that of F44 in the fed-batch fermentation. Furthermore, the engineered F44A showed a moderate increase in D-Asp amidation level (from 82 to 92%) compared to F44. The concomitant decrease of the negative charge inside the cell wall was detected by a newly developed method based on the nisin adsorption amount onto cell surface. Meanwhile, peptidoglycan cross-linkage increased from 36.8% (F44) to 41.9% (F44A), and intracellular pH can be better maintained by blocking extracellular H+ due to the maintenance of peptidoglycan integrity, which probably resulted from the action of inhibiting hydrolases activity. The inference was further supported by the acmC-overexpression strain F44C, which was characterized by uncontrolled peptidoglycan hydrolase activity. Our results provided a novel strategy for enhancing nisin yield through cell wall remodeling, which contributed to both continuous nisin synthesis and less nisin adsorption in acidic fermentation (dual enhancement).
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References
Andre G, Kulakauskas S, Chapot-Chartier MP, Navet B, Deghorain M, Bernard E, Hols P, Dufrene YF (2010) Imaging the nanoscale organization of peptidoglycan in living Lactococcus lactis cells. Nat Commun. doi:10.1038/ncomms1027
Bali V, Panesar PS, Bera MB (2016) Trends in utilization of agro-industrial byproducts for production of bacteriocins and their biopreservative applications. Crit Rev Biotechnol 36(2):204–214. doi:10.3109/07388551.2014.947916
Barreteau H, Kovac A, Boniface A, Sova M, Gobec S, Blanot D (2008) Cytoplasmic steps of peptidoglycan biosynthesis. FEMS Microbiol Rev 32(2):168–207. doi:10.1111/j.1574-6976.2008.00104.x
Bellon-Fontaine MN, Rault J, Van Oss C (1996) Microbial adhesion to solvents: a novel method to determine the electron-donor/electron-acceptor or Lewis acid-base properties of microbial cells. Colloids Surf B Biointerfaces 7(1):47–53. doi:10.1016/0927-7765(96)01272-6
Bernard E, Rolain T, Courtin P, Guillot A, Langella P, Hols P, Chapot-Chartier MP (2011) Characterization of O-acetylation of N-acetylglucosamine: a novel structural variation of bacterial peptidoglycan. J Biol Chem 286(27):23950–23958. doi:10.1074/jbc.M111.241414
Chapot-Chartier MP, Kulakauskas S (2014) Cell wall structure and function in lactic acid bacteria. Microb Cell Factories. doi:10.1186/1475-2859-13-S1-S9
De Arauz LJ, Jozala AF, Mazzola PG, Penna TCV (2009) Nisin biotechnological production and application: a review. Trends Food Sci Technol 20(3):146–154. doi:10.1016/j.tifs.2009.01.056
Du Y, Song L, Feng W, Pei G, Zheng P, Yu Z, Sun J, Qiao J (2013) Draft genome sequence of Lactococcus lactis subsp. lactis strain YF11. Genome Announc. doi:10.1128/genomeA.00599-13
Fernandez-Nino M, Marquina M, Swinnen S, Rodriguez-Porrata B, Nevoigt E, Arino J (2015) The cytosolic pH of individual Saccharomyces cerevisiae cells is a key factor in acetic acid tolerance. Appl Environ Microbiol 81(22):7813–7821. doi:10.1128/AEM.02313-15
Garcia-parra MD, Campelo AB, Garcia-almendarez BE, Regalado C, Rodriguez A, Martinez B (2010) Enhancement of nisin production in milk by conjugal transfer of the protease-lactose plasmid pLP712 to the wild strain Lactococcus lactis UQ2. Int J Dairy Technol 63(4):523–529. doi:10.1111/j.1471-0307.2010.00618.x
Hancock RE (1997) Peptide antibiotics. Lancet 349(9049):418–422. doi:10.1016/S0140-6736(97)80051-7
Hansen G, Johansen CL, Marten G, Wilmes J, Jespersen L, Arneborg N (2016) Influence of extracellular pH on growth, viability, cell size, acidification activity, and intracellular pH of Lactococcus lactis in batch fermentations. Appl Microbiol Biotechnol 100(13):5965–5976. doi:10.1007/s00253-016-7454-3
Hegde PS, White IR, Debouck C (2003) Interplay of transcriptomics and proteomics. Curr Opin Biotechnol 14(6):647–651. doi:10.1016/j.copbio.2003.10.006
Huard C, Miranda G, Redko Y, Wessner F, Foster SJ, Chapot-Chartier M-P (2004) Analysis of the peptidoglycan hydrolase complement of Lactococcus lactis: identification of a third N-acetylglucosaminidase, AcmC. Appl Environ Microbiol 70(6):3493–3499. doi:10.1128/AEM.70.6.3493-3499.2004
Jiang L, Liu Y, Yan G, Cui Y, Cheng Q, Zhang Z, Meng Q, Teng L, Ren X (2015) Aeration and fermentation strategies on nisin production. Biotechnol Lett 37(10):2039–2045. doi:10.1007/s10529-015-1886-1
Johnson JW, Fisher JF, Mobashery S (2013) Bacterial cell-wall recycling. Ann N Y Acad Sci 1277(1):54–75. doi:10.1111/j.1749-6632.2012.06813.x
Kong W, Blanchard AE, Liao C, Lu T (2017) Engineering robust and tunable spatial structures with synthetic gene circuits. Nucleic Acids Res 45(2):1005–1014. doi:10.1093/nar/gkw1045
Kong W, Kapuganti VS, Lu T (2015) A gene network engineering platform for lactic acid bacteria. Nucleic Acids Res 44(4):e37. doi:10.1093/nar/gkv1093
Kuhner D, Stahl M, Demircioglu DD, Bertsche U (2014) From cells to muropeptide structures in 24 h: peptidoglycan mapping by UPLC-MS. Sci Rep 4:7494. doi:10.1038/srep07494
Kramer NE, Hasper HE, van den Bogaard PT, Morath S, de Kruijff B, Hartung T, Smid EJ, Breukink E, Kok J, Kuipers OP (2008) Increased D-alanylation of lipoteichoic acid and a thickened septum are main determinants in the nisin resistance mechanism of Lactococcus lactis. Microbiology 154(6):1755–1762. doi:10.1099/mic.0.2007/015412-0
Larsen R, Buist G, Kuipers OP, Kok J (2004) ArgR and AhrC are both required for regulation of arginine metabolism in Lactococcus lactis. J Bacteriol 186(4):1147–1157. doi:10.1128/JB.186.4.1147-1157.2004
Lam H, Oh DC, Cava F, Takacs CN, Clardy J, De Pedro MA, Waldor MK (2009) D-amino acids govern stationary phase cell wall remodeling in bacteria. Science 325(5947):1552–1555. doi:10.1126/science.1178123
Lee TK, Huang KC (2013) The role of hydrolases in bacterial cell-wall growth. Curr Opin Microbiol 16(6):760–766. doi:10.1016/j.mib.2013.08.005
Leenhouts K, Buist G, Kok J (1999) Anchoring of proteins to lactic acid bacteria. Antonie Van Leeuwenhoek 76(1–4):367–376. doi:10.1023/A:1002095802571
Liang DM, Liu JH, Wu H, Wang BB, Zhu HJ, Qiao JJ (2015) Glycosyltransferases: mechanisms and applications in natural product development. Chem Soc Rev 44(22):8350–8374. doi:10.1039/C5CS00600G
Liu Y, Tang H, Lin Z, Xu P (2015) Mechanisms of acid tolerance in bacteria and prospects in biotechnology and bioremediation. Biotechnol Adv 33(7):1484–1492. doi:10.1016/j.biotechadv.2015.06.001
Lund P, Tramonti A, De Biase D (2014) Coping with low pH: molecular strategies in neutralophilic bacteria. FEMS Microbiol Rev 38(6):1091–1125. doi:10.1111/1574-6976.12076
Mainardi JL, Legrand R, Arthur M, Schoot B, Van Heijenoort J, Gutmann L (2000) Novel mechanism of β-lactam resistance due to bypass of DD-transpeptidation in Enterococcus faecium. J Biol Chem 275(22):16490–16496. doi:10.1074/jbc.M909877199
Matsui R, Cvitkovitch D (2010) Acid tolerance mechanisms utilized by Streptococcus mutans. Future Microbiol 5(3):403–417. doi:10.2217/FMB.09.129
Mercade M, Duperray F, Loubiere P (2003) Transient self-inhibition of the growth of Lactobacillus delbrueckii subsp. bulgaricus in a pH-regulated fermentor. Biotechnol Bioeng 84(1):78–87. doi:10.1002/bit.10751
Mercier R, Kawai Y, Errington J (2014) General principles for the formation and proliferation of a wall-free (L-form) state in bacteria. Elife. doi:10.7554/eLife.04629
Miao J, Xu M, Guo H, He L, Gao X, DiMarco-Crook C, Xiao H, Cao Y (2015) Optimization of culture conditions for the production of antimicrobial substances by probiotic Lactobacillus paracasei subsp. Tolerans FX-6. J Funct Foods 18:244–253. doi:10.1016/j.jff.2015.07.011
Mierau I, Kleerebezem M (2005) 10 years of the nisin-controlled gene expression system (NICE) in Lactococcus lactis. Appl Microbiol Biotechnol 68(6):705–717. doi:10.1007/s00253-005-0107-6
Ohnuma T, Onaga S, Murata K, Taira T, Katoh E (2008) LysM domains from Pteris ryukyuensis chitinase-A: a stability study and characterization of the chitin-binding site. J Biol Chem 283(8):5178–5187. doi:10.1074/jbc.M707156200
Papadimitriou K, Alegria A, Bron PA, De Angelis M, Gobbetti M, Kleerebezem M, Lemos JA, Linares DM, Ross P, Stanton C, Turroni F, Sindereni DV, Varmanen P, Ventura M, Zuniga M, Tsakalidou E, Kok J (2016) Stress physiology of lactic acid bacteria. Microbiol Mol Biol Rev 80(3):837–890. doi:10.1128/MMBR.00076-15
Parente E, Ricciardi A (1999) Production, recovery and purification of bacteriocins from lactic acid bacteria. Appl Microbiol Biotechnol 52(5):628–638. doi:10.1007/s002530051570
Pongtharangkul T, Demirci A (2006) Evaluation of culture medium for nisin production in a repeated-batch biofilm reactor. Biotechnol Prog 22(1):217–224. doi:10.1021/bp050295q
Reith J, Mayer C (2011) Peptidoglycan turnover and recycling in Gram-positive bacteria. Appl Microbiol Biotechnol 92(1):1–11. doi:10.1007/s00253-011-3486-x
Renye JA, Somkuti GA (2010) Nisin-induced expression of pediocin in dairy lactic acid bacteria. J Appl Microbiol 108(6):2142–2151. doi:10.1111/j.1365-2672.2009.04615.x
Rouse S, Field D, Daly KM, O'Connor PM, Cotter PD, Hill C, Ross RP (2012) Bioengineered nisin derivatives with enhanced activity in complex matrices. Microb Biotechnol 5(4):501–508. doi:10.1111/j.1751-7915.2011.00324.x
Sauvage E, Kerff F, Terrak M, Ayala JA, Charlier P (2008) The penicillin-binding proteins: structure and role in peptidoglycan biosynthesis. FEMS Microbiol Rev 32(2):234–258. doi:10.1111/j.1574-6976.2008.00105.x
Sham LT, Butler EK, Lebar MD, Kahne D, Bernhardt TG, Ruiz N (2014) MurJ is the flippase of lipid-linked precursors for peptidoglycan biogenesis. Science 345(6193):220–222. doi:10.1126/science.1254522
Shin JM, Gwak JW, Kamarajan P, Fenno JC, Rickard AH, Kapila YL (2016) Biomedical applications of nisin. J Appl Microbiol 120(6):1449–1465. doi:10.1111/jam.13033
Simsek O, Con A, Akkoc N, Saris P, Akcelik M (2009) Influence of growth conditions on the nisin production of bioengineered Lactococcus lactis strains. J Ind Microbiol Biotechnol 36(4):481. doi:10.1007/s10295-008-0517-4
Singh SK, Parveen S, SaiSree L, Reddy M (2015) Regulated proteolysis of a cross-link-specific peptidoglycan hydrolase contributes to bacterial morphogenesis. Proc Natl Acad Sci USA 112(35):10956–10961. doi:10.1073/pnas.1507760112
Solopova A, Formosa-Dague C, Courtin P, Furlan S, Veiga P, Pechoux C, Armalyte J, Sadauskas M, Kok J, Hols P (2016) Regulation of cell wall plasticity by nucleotide metabolism in Lactococcus lactis. J Biol Chem 291(21):11323–11336. doi:10.1074/jbc.M116.714303
Todorova K, Maurer P, Rieger M, Becker T, Bui NK, Gray J, Vollmer W, Hakenbeck R (2015) Transfer of penicillin resistance from Streptococcus oralis to Streptococcus pneumoniae identifies murE as resistance determinant. Mol Microbiol 97(5):866–880. doi:10.1111/mmi.13070
Trotter M, McAuliffe OE, Fitzgerald GF, Hill C, Ross RP, Coffey A (2004) Variable bacteriocin production in the commercial starter Lactococcus lactis DPC4275 is linked to the formation of the cointegrate plasmid pMRC02. Appl Environ Microbiol 70(1):34–42. doi:10.1128/AEM.70.1.34-42.2004
Typas A, Banzhaf M, Gross CA, Vollmer W (2011) From the regulation of peptidoglycan synthesis to bacterial growth and morphology. Nat Rev Microbiol 10(2):123–136. doi:10.1038/nrmicro2677
Van der Meulen SB, de Jong A, Kok J (2016) Transcriptome landscape of Lactococcus lactis reveals many novel RNAs including a small regulatory RNA involved in carbon uptake and metabolism. RNA Biol 13(3):353–366. doi:10.1080/15476286.2016.1146855
Veiga P, Erkelenz M, Bernard E, Courtin P, Kulakauskas S, Chapot-Chartier MP (2009) Identification of the asparagine synthase responsible for D-Asp amidation in the Lactococcus lactis peptidoglycan interpeptide crossbridge. J Bacteriol 191(11):3752–3757. doi:10.1128/JB.00126-09
Veiga P, Piquet S, Maisons A, Furlan S, Courtin P, Chapot-Chartier MP, Kulakauskas S (2006) Identification of an essential gene responsible for d-Asp incorporation in the Lactococcus lactis peptidoglycan crossbridge. Mol Microbiol 62(6):1713–1724. doi:10.1111/j.1365-2958.2006.05474.x
Visweswaran GRR, Kurek D, Szeliga M, Pastrana FR, Kuipers OP, Kok J, Buist G (2017) Expression of prophage-encoded endolysins contributes to autolysis of Lactococcus lactis. Appl Microbiol Biotechnol 101(3):1099–1110. doi:10.1007/s00253-016-7822-z
Visweswaran GRR, Steen A, Leenhouts K, Szeliga M, Ruban B, Hesseling-Meinders A, Dijkstra BW, Kuipers OP, Kok J, Buist G (2013) AcmD, a homolog of the major autolysin AcmA of Lactococcus lactis, binds to the cell wall and contributes to cell separation and autolysis. PLoS One 8(8):e72167. doi:10.1371/journal.pone.0072167
Vollmer W, Joris B, Charlier P, Foster S (2008) Bacterial peptidoglycan (murein) hydrolases. FEMS Microbiol Rev 32(2):259–286. doi:10.1111/j.1574-6976.2007.00099.x
Wheeler R, Turner RD, Bailey RG, Salamaga B, Mesnage S, Mohamad SA, Hayhurst EJ, Horsburgh M, Hobbs JK, Foster SJ (2015) Bacterial cell enlargement requires control of cell wall stiffness mediated by peptidoglycan hydrolases. MBio. doi:10.1128/mBio.00660-15
Wu C, Zhang J, Chen W, Wang M, Du G, Chen J (2012) A combined physiological and proteomic approach to reveal lactic-acid-induced alterations in Lactobacillus casei Zhang and its mutant with enhanced lactic acid tolerance. Appl Microbiol Biotechnol 93(2):707–722. doi:10.1007/s00253-011-3757-6
Yang R, Johnson MC, Ray B (1992) Novel method to extract large amounts of bacteriocins from lactic acid bacteria. Appl Environ Microbiol 58(10):3355–3359
Yin LM, Edwards MA, Li J, Yip CM, Deber CM (2012) Roles of hydrophobicity and charge distribution of cationic antimicrobial peptides in peptide-membrane interactions. J Biol Chem 287(10):7738–7745. doi:10.1074/jbc.M111.303602
Zhang J, Caiyin Q, Feng W, Zhao X, Qiao B, Zhao G, Qiao J (2016) Enhance nisin yield via improving acid-tolerant capability of Lactococcus lactis F44. Sci Rep 6:27973. doi:10.1038/srep27973
Zhang Y, Liu S, Du Y, Feng W, Liu J, Qiao J (2014) Genome shuffling of Lactococcus lactis subspecies lactis YF11 for improving nisin Z production and comparative analysis. J Dairy Sci 97(5):2528–2541. doi:10.3168/jds.2013-7238
Zheng H, Zhang D, Guo K, Dong K, Xu D, Wu Z (2015) Online recovery of nisin during fermentation coupling with foam fractionation. J Food Eng 162:25–30. doi:10.1016/j.jfoodeng.2015.04.006
Acknowledgements
This program was financially supported by the National Key Technology Support Program (2015BAD16B04), the National Natural Science Foundation of China (31570049, 32570089), and the Funds for Creative Research Groups of China (21621004). Dr. Jianjun Qiao was supported by the New Century Outstanding Talent Support Program of the Education Ministry of China.
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Hao, P., Liang, D., Cao, L. et al. Promoting acid resistance and nisin yield of Lactococcus lactis F44 by genetically increasing D-Asp amidation level inside cell wall. Appl Microbiol Biotechnol 101, 6137–6153 (2017). https://doi.org/10.1007/s00253-017-8365-7
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DOI: https://doi.org/10.1007/s00253-017-8365-7